Emerging technologies and their impact on regulatory science
READ 2022. Anklam E, Bahl MI, Ball R, Beger RD, Cohen J, Fitzpatrick S, Girard P, Halamoda-Kenzaoui B, Hinton D, Hirose A, Hoeveler A, Honma M, Hugas M, Ishida S, Kass GE, Kojima H, Krefting I, Liachenko S, Liu Y, Masters S, Marx U, McCarthy T, Mercer T, Patri A, Pelaez C, Pirmohamed M, Platz S, Ribeiro AJ, Rodricks JV, Rusyn I, Salek RM, Schoonjans R, Silva P, Svendsen CN, Sumner S, Sung K, Tagle D, Tong L, Tong W, Eijnden-van-Raaij JVD, Vary N, Wang T, Waterton J, Wang M, Wen H, Wishart D, Yuan Y, Slikker W. Exp Biol Med (Maywood) 2022; 247 (1):1-75. (available on 2023-01-01) PMID: 34783606 PMCID: PMC8749227. DOI: 10.1177/15353702211052280.
Data-Driven Optimization of Mixed-integer Bi-level Multi-follower Integrated Planning and Scheduling Problems Under Demand Uncertainty
READ 2022. Beykal B, Avraamidou S, Pistikopoulos EN. Comput Chem Eng 2022; 156 (): PMID: 34720250 PMCID: PMC8553017 (available on 2023-01-01) DOI: 10.1016/j.compchemeng.2021.107551.
Spatial and Temporal Analysis of Impacts of Hurricane Florence on Criteria Air Pollutants and Air Toxics in Eastern North Carolina
READ 2022. Bhandari S, Casillas G, Aly NA, Zhu R, Newman G, Wright FA, Miller A, Adler G, Rusyn I, Chiu WA. . Int J Environ Res Public Health 2022; 19 (3):1757. PMID: 35162780 PMCID: PMC8835244 DOI: 10.3390/ijerph19031757.
A tiered approach to population-based in vitro testing for cardiotoxicity: Balancing estimates of potency and variability
READ 2022. Blanchette AD, Burnett SD, Rusyn I, Chiu WA. J Pharmacol Toxicol Methods 2022; 114 ():107154. PMID: 34999233 PMCID: PMC8930538. doi: 10.1016/j.vascn.2022.107154
Characterization of Population Variability of 1,3-butadiene Derived Protein Adducts in Humans and Mice
READ 2022. Boysen G, Rusyn I, Chiu WA, Wright FA. Regul Toxicol Pharmacol. 2022. Jul:132:105171. PMID: 35469930 DOI: 10.1016/j.yrtph.2022.105171.
High-Resolution Demultiplexing (HRdm) Ion Mobility spectrometry-Mass Spectrometry for Aspartic and Isoaspartic Acid Determination and Screening
READ 2022. Butler KE, Dodds JN, Flick T, Campuzano IDG, Baker ES. Anal Chem. 2022 Apr 26;94(6):6191-6199. PMID: 35421308 DOI: 10.1021/acs.analchem.1c05533.
Biosensor applications in contaminated estuaries: Implications for disaster research response
READ 2022. Camargo K, Vogelbein MA, Horney JA, Dellapenna TM, Knap AH, Sericano JL, Wade TL, McDonald TJ, Chiu WA, Unger MA. Environ Res. 2022 Mar:204(Pt 1):111893. PMID:34419473 PMCID: PMC8639622. DOI: 10.1016/j.envres.2021.111893.
Combining Isotopologue Workflows and Simultaneous Multidimensional Separations to Detect, Identify, and Validate Metabolites in Untargeted Analyses
READ 2022. Dodds JN, Wang L, Patti GJ, Baker ES. Anal Chem. 2022 Feb8;95(5):2527-2535. PMID: 35089687 PMCID: PMC8934380 DOI: 10.1021/acs.analchem.1c04430.
A participatory-based research approach for assessing exposure to lead-contaminated drinking water in the Houston neighborhood of the Greater Fifth Ward
READ 2022. Fawkes, LS, McDonald TJ, Roh T, Chiu WA, Taylor RJ, Sansom GT. IJERPH:19(13):8135. https://doi.org/10.3390/ijerph19138135.
Montmorillonite clay-based sorbents decrease the bioavailability of per- and polyfluoroalkyl substances (PFAS) from soil and their translocation to plants
READ 2022. Hearon SE, Orr AA, Moyer H, Wang M, Tamamis P, Phillips TD. Environ Res 2022; 205 ():112433. PMID: 34875259 PMCID: PMC8760172 (available on 2023-04-01) DOI: 10.1016/j.envres.2021.112433
Grouping of UVCB substances with dose-response transcriptomics data from human cell-based assays
READ 2022. House JS, Grimm FA, Klaren WD, Dalzell A, Kuchi S, Zhang SD, Lenz K, Boogaard PJ, Ketelslegers HB, Gant TW, Rusyn I, Wright FA. ALTEX. 2022 Mar 10: PMID: 35288757. DOI: 10.14573/altex.2107051.
Development and Application of Multidimensional Lipid Libraries to Investigate Lipidomic Dysregulation Related to Smoke Inhalation Injury Severity
READ 2022. Kirkwood KI, Christopher MW, Burgess JL, Littau SR, Foster K, Richey K, Pratt BS, Shulman N, Tamura K, MacCoss MJ, MacLean BX, Baker ES. J Proteome Res 2022 Jan 7;21(1):232-242.PMID: 34874736 PMCID: PMC8741653 DOI: 10.1021/acs.jproteome.1c00820.
Utilizing Pine Needles to Temporally and Spatially Profile Per- and Polyfluoroalkyl substances (PFAS)
READ 2022. Kirkwood KI, Fleming J, Nguyen H, Reif DM, Baker ES, Belcher SM. Environ Sci Technol. 2022 Mar 15;56(6):3441-3451. PMID: 35175744 PMCID: PMC9199521 DOI: 10.1021/acs.est.1c06483.
Utilizing Skyline to Analyze Lipidomics Data Containing Liquid Chromatography, Ion Mobility Spectrometry and Mass Spectrometry Dimensions
READ 2022. Kirkwood KI, Pratt BS. Shulman N, Tamura K, MacCoss MJ, MacLean BX, Baker ES. Nature protocols. https://doi.org/10.1038/s41596-022-00714-6.
Surveys of Community Garden Affiliates and Soils in Houston, Texas
READ 2022. Kirsch KR, McDonald TJ, Newman GD, Xu X, Horney JA. Environ Monit Assess. 2022 Apr 6:194(5):330 PMID: 35384492 DOI: 10.1007/s10661-022-09997-4.
Modeling the Relationships Between Historical Redlining, Urban heat, and heat-Related Emergency Department Visits: An Examination of 11 Texas Cities
READ 2022. Li, D, Newman GD, Wilson B, Zhang Y, Brown RD. Environ Plan B Urban Anal City Sci. 2022 Mar 49(3):933-952. PMID: 35474708 PMCID: PMC9037692 DOI: 10.1177/23998083211039854.
A Python Script for Longitudinally Measuring the Duration of Vacant Land Uses
READ 2022. Newman G, Kim Y, Kim G, Lee RJ, Gu D, Forghanparast K, Goldberg D. J Spat Sci. 202;67(1):129-141. PMID: 35233188 PMCID: PMC8884466 DOI: 10.1080/14498596.2020.1721344.
Development and characterization of chlorophyll-amended montmorillonite clays for the adsorption and detoxification of benzene
READ 2022. Rivenbark KJ, Wang M, Lilly K, Tamamis P, Phillips TD. Water Research 221, 1 August 2022, 118788. https://doi.org/10.1016/j.watres.2022.118788.
Model Systems and Organisms for Addressing Inter- and Intra-Species Variability in Risk Assessment
READ 2022. Rusyn I, Chiu WA, Wright FA. Regulatory Tox and Pharmacol 132, 2022, 105197. https://doi.org/10.1016/j.yrtph.2022.105197.
Decision-Making with New Approach Methodologies: Time to Replace Default Uncertainty Factors with Data
READ 2022. Rusyn I, Chiu WA. Toxicol Sci. 2022 Apr 11:kfac033. PMID: 35404442 DOI: 10.1093/toxsci/kfac033.
A Model of Human Small Airway on a Chip for Studies of Subacute Effects of Inhalation Toxicants
READ 2022. Sakolish C, Georgescu A, Huh DD, Rusyn I. Toxicol Sci. 2022 May 26:187(2):267-278. PMID: 35357501 PMCID: PMC9154286 DOI: 10.1093/toxsci/kfac036.
Cancer Risk Associated with Soil Distribution of Polycyclic Aromatic Hydrocarbons Within Three Environmental Justice Neighborhoods in Houston, Texas
READ 2022. Sansom GT, Fawkes LS, Thompson CM, Losa LM, McDonald TJ, Chiu WA. Environ Geochem Health. 2022 Mar 4. PMID: 35246781 DOI: 10.1007/s10653-022-01245-5.
Quality Control for Single Cell Imaging Analytics Using Endocrine Disruptor-Induced Changes in Estrogen Receptor Expression
READ 2022. Stossi F, Singh PK, Mistry RM, Johnson HL, Dandekar RD, Mancini MG, Szafran AT, Rao AU, Mancini MA. Environ Health Perspect. 2022 Feb:130(2):27008. PMID:35167326 PMCID: PMC8846386 DOI: 10.1289/EHP9297
Inclusion of Montmorillonite Clays in Environmental Barrier Formulations to Reduce Skin Exposure to Water-Soluble Chemicals from Polluted Water
READ 2022. Wang M, and Phillips TD. ACS Appl. Mater. Interfaces 2022, 14, 20, 23232-23244. https://doi.org/10.1021/acsami.2c04676
Environmental impacts of Hurricane Florence flooding in eastern North Carolina: temporal analysis of contaminant distribution and potential human health risks
READ 2021. Aly NA, Casillas G, Luo YS, McDonald TJ, Wade TL, Zhu R, Newman G, Lloyd D, Wright FA, Chiu WA, Rusyn I. J Expo Sci Environ Epidemiol 2021 Sep 3;31(5):810-822. Epub 2021 Apr 24. PMID: 3389577 PMCID: PMC8448918 (available on 2021-10-24) DOI: 10.1038/s41370-021-00325-5
A Preprocessing Tool for Enhanced Ion Mobility-Mass Spectrometry-Based Omics Workflows
READ 2021. Bilbao A, Gibbons BC, Stow SM, Kyle JE, Bloodsworth KJ, Payne SH, Smith RD, Ibrahim YM, Baker ES, Fjeldsted JC. J Proteome Res 2021 Aug12. PMID: 34382401 PMCID: PMC8837709 DOI: 10.1021/acs.jproteome.1c00425
Buy them out before they are built: evaluating the proactive acquisition of vacant land in flood-prone areas
READ 2021. Atoba K, Newman G, Brody S, Highfield W, Kim Y, Juan A. Environ Conserv 2021; 48 (2):118-126. PMID: 34887609 PMCID: PMC8653987. DOI: 10.1017/s0376892921000059.
Utilizing ion mobility spectrometry-mass spectrometry for the characterization and detection of persistent organic pollutants and their metabolites
READ 2021. Aly NA, Dodds JN, Luo YS, Grimm FA, Foster M, Rusyn I, Baker ES. Anal Bioanal Chem. 2021 Oct 20. PMID: 34668045. PMCID: PMC8727508 DOI: 10.1007/s00216-021-03686-w
Utilizing Ion Mobility-Mass Spectrometry to Investigate the Unfolding Pathway of Cu/Zn Superoxide Dismutase
READ 2021. Butler KE, Takinami Y, Rainczuk A, Baker ES, Roberts BR. Front Chem 2021 Feb9;9:614595. eCollection 2021. PMID: 33634076 PMCID: PMC7900566 DOI: 10.3389/fchem.2021.614595
Polycyclic Aromatic Hydrocarbons in Houston Parks After Hurricane Harvey
READ 2021. Casillas GA, Johnson NM, Chiu WA, Ramirez J, McDonald TJ, Horney JA. Environ Justice 2021 Aug 1; 14 (4):277-287. Epub 2021 Aug 12. PMID: 34484557 PMCID: PMC8404169 (available on 2022-08-30) DOI: 10.1089/env.2020.0073
Potential Human Health Hazard of Post-Hurricane Harvey Sediments in Galveston Bay and Houston Ship Channel: A Case Study of Using In Vitro Bioactivity Data to Inform Risk Management Decisions
READ 2021. Chen Z, Jang S, Kaihatu JM, Zhou YH, Wright FA, Chiu WA, Rusyn I. . Int J Environ Res Public Health 2021;18 (24). PMID: 34948986 PMCID: PMC8702027 DOI: 10.3390/ijerph182413378.
Improving the Speed and Selectivity of Newborn Screening Using Ion Mobility Spectrometry-Mass Spectrometry
READ 2021. Dodds JN, Baker ES. Anal Chem 2021; 93 (51):17094-17102. PMID: 34851605 PMCID: PMC8730783 DOI: 10.1021/acs.analchem.1c04267
From Pesticides to Per- and Polyfluoroalkyl Substances: An Evaluation of Recent Targeted and Untargeted Mass Spectrometry Methods for Xenobiotics
READ 2021. Dodds JN, Alexander NLM, Kirkwood KI, Foster MR, Hopkins ZR, Knappe DRU, Baker ES. Anal. Chem. 2021, 93, 1, 641–656 PMID: 33136371 PMCID:PMC7855838 DOI: 10.1021/acs.analchem.0c04359.
A Bayesian population physiologically based pharmacokinetic absorption modeling approach to support generic drug development: application to bupropion hydrochloride oral dosage forms
READ 2021. Hsieh NH, Bois FY, Tsakalozou E, Ni Z, Yoon M, Sun W, Klein M, Reisfeld B, Chiu WA. J Pharmacokinet Pharmacodyn 2021Sep22. Online ahead of print. PMID: 34553275 DOI: 10.1007/s10928-021-09778-5
Aflatoxin Exposure Among Mothers and Their Infants from the Western Highlands of Guatemala
READ 2021. Jolly PE, Mazariegos M, Contreras H, Balas N, Junkins A, Aina IO, Minott S, Wang M, Phillips TD. Matern Child Health J 2021; 25 (8):1316-1325. Epub 2021 May 4. PMID: 33945085 PMCID: PMC8404172 DOI: 10.1007/s10995-021-03151-1
From Plants to Ants: Fungal Modification of Leaf Lipids for Nutrition and Communication in the Leaf-Cutter Ant Fungal Garden Ecosystem
READ 2021. Khadempour L, Kyle JE, Webb-Robertson BM, Nicora CD, Smith FB, Smith RD, Lipton MS, Currie CR, Baker ES, Burnum-Johnson KE. mSystems 2021 Mar 23;6 (2): e01307-20. PMID: 33758033 PMCID:PMC8547007. DOI: 10.1128/mSystems.01307-20
A Consistent Nonlinear Mild-Slope Equation Model
READ 2021. Kim I-C, Kaihatu JM. Coast Eng. 2021 Dec;170:104006. PMID: 3553066 PMCID: PMC9075342 DOI: 10.1016/j.coastaleng.2021.104006
Recommendations for good practice in MS-based lipidomics
READ 2021. Köfeler HC, Ahrends R, Baker ES, Ekroos K, Han X, Hoffmann N, Holčapek M, Wenk MR, Liebisch G. J Lipid Res 2021; 62 ():100138. PMID: 34552536 PMCID: PMC8585648 DOI: 10.1016/j.jlr.2021.100138.
Key Characteristics of Cardiovascular Toxicants
READ 2021. Lind L, Araujo JA, Barchowsky A, Belcher S, Berridge BR, Chiamvimonvat N, Chiu WA, Cogliano VJ, Elmore S, Farraj AK, Gomes AV, McHale CM, Meyer-Tamaki KB, Posnack NG, Vargas HM, Yang X, Zeise L, Zhou C, Smith MT. Environ Health Perspect 2021 Sep; 129 (9):95001. Epub 2021 Sep 24. PMID: 34558968 PMCID: PMC8462506 DOI: 10.1289/EHP9321
The projected impacts of smart decline on urban runoff contamination levels
READ 2021. Zhu R, Newman G. Comput Urban Sci 2021; 1 (1):2. PMID: 34888588 PMCID: PMC8653986 DOI: 10.1007/s43762-021-00002-1
Urban resilience: Analyzing the policies of U.S. cities
READ 2021. Woodruff S, Bowman A, Hannibal B, Sansom G, Portney K. Cities 2021 Aug;115:103239. PMID: 34803206 PMCID: PMC8605798 DOI: 10.1016/j.cities.2021.103239.
A Histoplasma capsulatum Lipid Metabolic Map Identifies Antifungal Targets
READ 2021. Zamith-Miranda D, Heyman HM, Burnet MC, Couvillion SP, Zheng X, Munoz N, Nelson WC, Kyle JE, Zink EM, Weitz KK, Bloodsworth KJ, Clair G, Zucker JD, Teuton JR, Payne SH, Kim YM, Reyes Gil M, Baker ES, Bredeweg EL, Nosanchuk JD, Nakayasu ES. mBio 2021; 12 (6):e0297221. PMID: 34809453 PMCID: PMC8609360 DOI: 10.1128/mBio.02972-21
Tight Sorption of Arsenic, Cadmium, Mercury, and Lead by Edible Activated Carbon and Acid-Processed Montmorillonite Clay
READ 2021. Wang M, Bera G, Mitra K, Wade TL, Knap AH, Phillips TD. Environ Sci Pollut Res Int. 2021 Feb;28(6):6758-6770 PMID: 33009611 PMCID: PMC7855320 DOI: 10.1007/s11356-020-10973-z
Application of edible montmorillonite clays for the adsorption and detoxification of microsystin
READ 2021. Wang M, Rivenbark K, Gong J, Wright FA, Phillips TD. ACS Appl. Bio. Mater. 2021, 4, 9, 7254-7265. PMID: 34746680 PMCID: PMC8570584. https://doi.org/10.1021/acsabm.1c00779.
Green infrastructure for coastal flood protection: The longitudinal impacts of green infrastructure patterns on flood damage
READ 2021. Sohn W, Bae J, Newman G. Appl Geogr 2021; 135:102565 PMID: 34621098 PMCID: PMC8492007 DOI: 10.1016/j.apgeog.2021.102565.
Analysis of reproducibility and robustness of a human microfluidic four-cell liver acinus microphysiology system (LAMPS)
READ 2021. Sakolish C, Reese CE, Luo YS, Valdiviezo A, Schurdak ME, Gough A, Taylor DL, Chiu WA, Vernetti LA, Rusyn I. Toxicology 2021 Jan 30; 448:152651. Epub 2020 Dec 8. PMID: 33307106 PMCID: PMC7785655 (available on 2022-01-30) DOI: 10.1016/j.tox.2020.152651
A Comparative Analysis of Analytical Techniques for Rapid Oil Spill Identification
READ 2021. Roman-Hubers AT, McDonald TJ, Baker ES, Chiu WA, Rusyn I. Environ Toxicol Chem. 2021 apr;40(4):1034-1049. PMID: 33315271 PMCID: PMC8104454 DOI: 10.1002/etc.4961.
Combining Co$ting Nature and Suitability Modeling to Identify High Flood Risk Areas in Need of Nature-Based Services
READ 2021. Prybutok S, Newman G, Atoba K, Sansom G, Tao Z. Land (Basel) 2021 Aug; 10 (8):853. Epub 2021 Aug 15. PMID: 34532079 PMCID: PMC8443209 DOI: 10.3390/land10080853
When Apologies become Meaningful: Perceptions of Apologies in Environmental Justice Communities
READ 2021. Perez MJ, Crist JD, Kirsch KR, Salter PS, Horney JA. J Environ Psychol 2021; 77:101675 PMID: 34720327 PMCID:PMC8555765 DOI: 10.1016/j.jenvp.2021.101675.
Hydroxylated Chalcones as Aryl Hydrocarbon Receptor Agonists: Structure-Activity Effects
READ 2021. Park H, Jin UH, Karki K, Allred C, Davidson LA, Chapkin RS, Orr AA, Nowshad F, Jayaraman A, Tamamis P, Safe S. Toxicol Sci 2021 Feb 26; 180 (1):148-159. PMID: 33263770 PMCID: PMC7916741 (available on 2021-12-02) DOI: 10.1093/toxsci/kfaa179
Analysis of per- and polyfluoroalkyl substances in Houston Ship Channel and Galveston Bay following a large-scale industrial fire using ion-mobility-spectrometry-mass spectrometry
READ 2022. Valdiviezo A, Aly NA, Luo Y-S, Cordova A, Casillas G, Foster M, Baker ES, Rusyn I. J Environ Sciences 115:350-362 May 2022. https://doi.org/10.1016/j.jes.2021.08.004. Available online 22 August 2021.
Data Processing Workflow to Identify Structurally Related Compounds in Petroleum Substances Using Ion Mobility Spectrometry-Mass Spectrometry
READ 2021. Roman-Hubers AT, Cordova AC, Aly NA, McDonald TJ, Lloyd DT, Wright FA, Baker ES, Chiu WA, Rusyn I. 2021. Energy Fuels. 2021 Jul 1;35(13):10529-10539. doi: 10.1021/acs.energyfuels.1c00892. Epub 2021 Jun 16.
Gene Expression and DNA Methylation Alterations in the Glycine N-Methyltransferase Gene in Diet-Induced Nonalcoholic Fatty Liver Disease-Associated Carcinogenesis
READ 2019. Borowa-Mazgaj B, de Conti A, Tryndyak V, Steward CR, Jimenez L, Melnyk S, Seneshaw M, Mirshahi F, Rusyn I, Beland FA, Sanyal AJ, Pogribny IP. Toxicological Sciences, Volume 170, Issue 2, August 2019, Pages 273–282, https://doi.org/10.1093/toxsci/kfz110
Testing the efficacy of broad-acting sorbents for environmental mixtures using isothermal analysis, mammalian cells, and H. vulgaris
READ 2021. Wang M, Chen Z, Rusyn I, Phillips TD 2020.
J Hazard Mater. 2021 Apr 15;408:124425. doi: 10.1016/j.jhazmat.2020.124425. Epub 2020 Oct 28.
Quantitative In Vitro-to-In Vivo Extrapolation for Mixtures: A Case Study of Superfund Priority List Pesticides
READ 2021. Valdiviezo A, Luo Y-S, Chen Z, Chiu WA, Rusyn I. 2021. Toxicological Sciences, Volume 183, Issue 1, September 2021, Pages 60–69, https://doi.org/10.1093/toxsci/kfab076
Coping with post-hurricane mental distress: The role of neighborhood green space.
READ 2021. Li D, Newman G, Zhang T, Zhu R, Horney J 2021. Soc Sci Med. 2021 Jul;281:114084. doi: 10.1016/j.socscimed.2021.114084. Epub 2021 Jun 1.
Curated Data In – Trustworthy In Silico Models Out: The Impact of Data Quality on the Reliability of Artificial Intelligence Models as Alternatives to Animal Testing
READ 2021. Alves VM, Auerbach SS, Kleinstreuer N, Rooney JP, Muratov EN, Rusyn I, Tropsha A, Schmitt C 2021. Altern Lab Anim. 2021 Jul 7;2611929211029635. doi: 10.1177/02611929211029635. Online ahead of print.
Characterizing baseline legacy chemical contamination in urban estuaries for disaster-research through systematic evidence mapping: A case study
READ 2021. Camargo KM, Foster M, Buckingham B, McDonald TJ, Chiu WA 2021. Chemosphere. 2021 Oct;281:130925. doi: 10.1016/j.chemosphere.2021.130925. Epub 2021 May 22.
Multiobjective Optimization of Mixed-Integer Linear Programming Problems: A Multiparametric Optimization Approach
READ 2021. Pappas I, Avraamidou S, Katz J, Burnak B, Beykal B, Türkay M, Pistikopoulos EN 2021. Ind Eng Chem Res. 2021 Jun 16;60(23):8493-8503. doi: 10.1021/acs.iecr.1c01175. Epub 2021 Jun 4.
Bi-level Mixed-Integer Data-Driven Optimization of Integrated Planning and Scheduling Problems
READ 2021. Beykal B, Avraamidou S, Pistikopoulos EN 2021. ESCAPE. 2021;50:1707-1713. doi: 10.1016/b978-0-323-88506-5.50265-5. Epub 2021 Jul 18.